BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002F12SP1|AL425009
(993 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1605 1721 0.0
>3x_Contig1605
Length = 12373
Score = 1721 bits (863), Expect = 0.0
Identities = 913/928 (98%), Gaps = 6/928 (0%)
Strand = Plus / Minus
Query: 1 gatcgctacaggcgataacgttttcgtcaaacaatgagtactcatctgaacttgtctcat 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6114 gatcgctacaggcgaaaacgttttcgtcaaacaatgagtactcatctgaacttgtctcat 6055
Query: 61 attcatagtttatttgaaatggagaacccctctaacgcaggctttttgtctcctaaaaat 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 6054 attcatagtttatttgaaatggagaacccc-ctaacgcaggctttttgtctcctaaaaat 5996
Query: 121 ttcataaattcagaataatctgacgcaccacctcctatcaaatccatagcataaccattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5995 ttcataaattcagaataatctgacgcaccacctcctatcaaatccatagcataaccattc 5936
Query: 181 gtagctgaaaattttacgttcttacaagaatcataaaatgatgatgcccatgaagagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5935 gtagctgaaaattttacgttcttacaagaatcataaaatgatgatgcccatgaagagttc 5876
Query: 241 aaaaagaaattcaactcagaaacaatttctctaccatcactcgattcatctgtactaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5875 aaaaagaaattcaactcagaaacaatttctctaccatcactcgattcatctgtactaatt 5816
Query: 301 atatcaataaactgcctttggttaggagaacaagtgaagtgacagaraattgtgttgaaa 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5815 atatcaataaactgcctttggttaggagaacaagtgaagtgacagaaaattgtgttgaaa 5756
Query: 361 ttcttcttacaagctggacaggragcgattatgctttctgctttattcaagttttctttc 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 5755 ttcttcttacaagctggacaggaagcgattatgctttctgctttattcaagttttctttc 5696
Query: 421 waagcttccatttgttytctggtayaacataacctttcattgtctcgccattcctcccca 480
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5695 aaagcttccatttgttctctggtacaacataacctttcattgtctcgccattcctcccca 5636
Query: 481 catatatccacaagaaactgtacatcgccttgatcaattactggaggttcaaagtctgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5635 catatatccacaagaaactgtacatcgccttgatcaattactggaggttcaaagtctgca 5576
Query: 541 tccacgggacatggtaaagacgcaccaaagacgcccttcttaccacaattcccatacatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5575 tccacgggacatggtaaagacgcaccaaagacgcccttcttaccacaattcccatacatc 5516
Query: 601 gcgcacgattcctgtgcatagcatgtatgtrttaacagtgcgactgccacataaatccat 660
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5515 gcgcacgattcctgtgcatagcatgtatgtattaacagtgcgactgccacataaatccat 5456
Query: 661 tggtaccacatcagcgt--gagaatccaacttgctgtagtggggttcacgtctcgtcttt 718
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5455 tggtaccacatcagcgtagcagaatccaacttgctgtagtggggttcacgtctcgtcttt 5396
Query: 719 cctttatggttttaaaggtttctaaagggtttttaatcgacaaagttcaaatataactct 778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5395 cctttatggttttaaaggtttctaaagggtttttaatcgacaaagttcaaatataactct 5336
Query: 779 tgttaaatattaaaaatgtttgaacctatttttcacgcttgcaacataaacaaaagttct 838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5335 tgttaaatattaaaaatgtttgaacctatttttcacgcttgcaacataaacaaaagttct 5276
Query: 839 aaagggaatacaaaaaagaataatagcatttttgtcc-aacacggctgcag-twactatt 896
||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||||
Sbjct: 5275 aaagggaatacaaaaaagaataatagcatttttgtccaaacacggctgcagttaactatt 5216
Query: 897 aatctgctgcatgcc-ataactgttagc 923
||||||||||||||| ||||||||||||
Sbjct: 5215 aatctgctgcatgccaataactgttagc 5188
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7475
Number of Sequences: 1807
Number of extensions: 7475
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 1
length of query: 993
length of database: 10,358,551
effective HSP length: 16
effective length of query: 977
effective length of database: 10,329,639
effective search space: 10092057303
effective search space used: 10092057303
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)